PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_34266
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 177aa    MW: 19438.7 Da    PI: 10.2557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_34266genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-20453255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+++tae+Aa a+++a+++++g
  PEQU_34266  4 QYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTYDTAEGAAIAYDQAALQFKG 53
                69*******.**********94....45**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-32362IPR001471AP2/ERF domain
CDDcd000181.17E-29462No hitNo description
PROSITE profilePS5103224.566461IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-22462IPR016177DNA-binding domain
SMARTSM003804.7E-36467IPR001471AP2/ERF domain
PfamPF008471.4E-13453IPR001471AP2/ERF domain
PRINTSPR003673.5E-11516IPR001471AP2/ERF domain
PRINTSPR003673.5E-112743IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
RRRQYRGVRQ RPWGKWAAEI RDPKKAARVW LGTYDTAEGA AIAYDQAALQ FKGTKAKLNF  60
PERVQGRTEL GFVVSRGIPA RRPKQVATLQ PSLYPDLLQY AQILQSGDED HQNGREVFTL  120
ESSSAIAQTS SSSISFAGLS GMESSARPNL MLNFGSKESG SGCWAKEDEG GGRDSGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-25365467ATERF1
3gcc_A5e-25365467ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929690.17e-61PREDICTED: ethylene-responsive transcription factor ERF113
SwissprotQ9FH542e-40EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLM0T5634e-58M0T563_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P08140_0011e-57(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-33ERF family protein